Top Most Downloaded S/R Software

Propensity score matching in SPSS Provides SPSS custom dialog to perform propensity score matching. Using the SPSS-R plugin, the software calls several R packages, mainly MatchIt and optmatch. Proper citations of these R packages is provided in the program. SPSSPropensity Scores ...

Similar to the windows R gui built in editor, NppToR aims to extend the functionality of code passing to the Notepad++ code editor. In addition to passing to the R gui, NppToR provides optional passing to a PuTTY window for passing to an R instance a remote machine. Easy shortcuts are also provided for easy batch exe...

These R packages are developed for data analysis of PK/PD modeling & simulation, bioequivalence/bioavailability (BE/BA), drug stability, in-vitro and in-vivo correlation (ivivc), as well as therapeutic drug monitoring (TDM). R & R packages, JAGS (bayesian inference), gWidgets (R GUI)bioequivalence/bioavailabil...

AMEN (Annotation, Mapping, Expression and Network) is a stand-alone, unified suite of tools to manage, explore and combine biological multifaceted high-throughput data such as annotation, chromosomal location, expression and interaction data....

TXM is a free and open-source cross-platform Unicode & XML based text/corpus analysis environment and graphical client, supporting Windows, Linux and Mac OS X. It can also be used online as a J2EE standard compliant web portal (GWT based) with access control built in. DOWNLOAD LATEST VERSION OF TXM : http://textom...

We are developing data standards and software tools that implement these standards to develop a systemic approach to modeling, capturing, analyzing and disseminating flow cytometry data....

The application Bio7 is an integrated development environment for ecological modelling and contains powerful tools for model creation, scientific image analysis and statistical analysis. The application itself is based on an RCP-Eclipse-Environment (Rich-Client-Platform) which offers a huge flexibility in configuration...

gVirtualXRay is a C++ library to simulate X-ray imaging. It is based on the Beer-Lambert law to compute the absorption of light (i.e. photons) by 3D objects (here polygon meshes). It is implemented on the graphics processing unit (GPU) using the OpenGL Shading Language (GLSL). SimpleGVXR is a smaller library build on ...

The Life Cycle Assessment Spreadsheet allows you to calculate carbon footprints and other environmental impacts for given product systems. Use requires basic skills in LCA and matrix algebra, but rewards effort with professional analytical tools....

SPINA is software for determining constant structure-parameters of endocrine feedback control systems from hormone levels obtained in vivo. The first version of this cybernetic approach allows for evualuating the functional status of the thyroid gland, i.e. thyroid's secretory capacity (GT or SPINA-GT) and sum activity...

Computing similarity factor (f2) bootstrap bias corrected and accelerated confidence interval R staticstical environmentGUI based on Shiny package ...

Copy Number Analysis for Targeted Resequencing (CONTRA) is a tool for copy number variation (CNV) detection for targeted resequencing data such as those from whole-exome capture data....

Ensemble de fonctions permettant, à partir d'une base de données contenant les paramètres analyseurs, de réaliser les calculs d'incertitudes sur les mesures automatiques agrégrées de qualité de l'air. qualité de l'aircalcul d'incertitudesincertitudes sur la mesures gazincertitudes sur la mesures particules ...

Aberration Detection in Tumour Exome (ADTEx) is a tool for copy number variation (CNV) detection for whole-exome data from paired tumour/matched normal samples....

SPiCEv2.1 is a tool to predict the splice alteration of variant occuring in consensus splice site (Donor: -3; +6 and Acceptor: -12; +2). You can also download SPiCE for Win 64 bits: https://sourceforge.net/projects/spicev2-1/files/SPiCEInstall64bit.exe/download You can also download SPiCE for Win 32 bits: https://sour...

PANDA is a comprehensive and flexib tool for quantitative proteomics data analysis, which is developed based on our solid foundations in quantitative proteomics for years. Several novelties have been implemented in it. First, we implement the advantage algorithms of LFQuant (Proteomics 2012, 12, (23-24), 3475-84) and S...

ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumors using Expression data) is a new approach to use gene expression signature to infer the fraction of stromal and immune cells in tumor tissues....

The RDXplorer is a computational tool for copy number variants (CNV) detection in whole human genome sequence data using read depth (RD) coverage. CNV detection is based on the Event-Wise Testing (EWT) algorithm recently published by our group....

The new site is at http://psychometricon.net/libirt/ Library of functions to estimate the items and abilities from the responses of subjects to a questionnaire. The IRT models supported are the logistic model, the multivariate logistic model, the graded model and smoothing by penalization and kernel....

An open-source implementation of our network-based target deconvolution approach, named target addiction score (TAS). License: The TAS R-package is made available under the terms of the GNU General Public License, which means that the source code is freely available for use within other software, but if you alter the...